BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029B09LP1|AL429019
(870 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1530 1681 0.0
>3x_Contig1530
Length = 6216
Score = 1681 bits (848), Expect = 0.0
Identities = 865/868 (99%), Gaps = 2/868 (0%)
Strand = Plus / Plus
Query: 5 aattcattttccacgttctagcattcaaagtcctatacgggctgatccgggttgaagaca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4571 aattcattttccacgttctagcattcaaagtcctatacgggctgatccgggttgaagaca 4630
Query: 65 ttgtcaggtggggagtttggctggggcggcacatctgttaaacgataacgcagatgtcct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4631 ttgtcaggtggggagtttggctggggcggcacatctgttaaacgataacgcagatgtcct 4690
Query: 125 aagggggactcatggagaacagaaatctccagtagaacaaaagggtaaaagtccccttga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4691 aagggggactcatggagaacagaaatctccagtagaacaaaagggtaaaagtccccttga 4750
Query: 185 ttttgattttcagtgtgaatacaaaccatgaaagtgtggcctatcgatcctttaggtcct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4751 ttttgattttcagtgtgaatacaaaccatgaaagtgtggcctatcgatcctttaggtcct 4810
Query: 245 cggaatttgaggctagaggtgccagaaaagttaccacagggataactggcttgtggcagt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4811 cggaatttgaggctagaggtgccagaaaagttaccacagggataactggcttgtggcagt 4870
Query: 305 caagcgttcatagcgacattgctttttgattcttcgatgtcggctcttcctatcataccg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4871 caagcgttcatagcgacattgctttttgattcttcgatgtcggctcttcctatcataccg 4930
Query: 365 aagcagaattcggtaagcgttggattgttcacccactaatagggaacgtgagccgggttt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 4931 aagcagaattcggtaagcgttggattgttcacccactaatagggaacgtgagctgggttt 4990
Query: 425 agaccgtcgtgaga-aggttagttttaccctactgatgaatgttatcgcaatagtaattg 483
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4991 agaccgtcgtgagacaggttagttttaccctactgatgaatgttatcgcaatagtaattg 5050
Query: 484 aacttagtacgagaggaacagttcattcggataattggtttttgcggctgtctgatcagg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5051 aacttagtacgagaggaacagttcattcggataattggtttttgcggctgtctgatcagg 5110
Query: 544 cattgccgcgaa-ctaccatccgctggattatggctgaacgcctctaagtcagaatccat 602
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5111 cattgccgcgaagctaccatccgctggattatggctgaacgcctctaagtcagaatccat 5170
Query: 603 gctagaacgcgatgatttctttgccttgcacaatatagaaggataagaataaggcgtctt 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5171 gctagaacgcgatgatttctttgccttgcacaatatagaaggataagaataaggcgtctt 5230
Query: 663 tttggcgtcgctgaaccatagcaggctggcaacggtgctcttagcggaaaggctttgggt 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5231 tttggcgtcgctgaaccatagcaggctggcaacggtgctcttagcggaaaggctttgggt 5290
Query: 723 gcttgccggcgaattgcaatgtcattttgcgcaaggataaatcatttgtatacgacttaa 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5291 gcttgccggcgaattgcaatgtcattttgcgcaaggataaatcatttgtatacgacttaa 5350
Query: 783 atgtacaacagggtattgtaagcagtagagtagccttgttgttacgatctgctgagatta 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5351 atgtacaacagggtattgtaagcagtagagtagccttgttgttacgatctgctgagatta 5410
Query: 843 agccttcgttgtctgatttgttactttc 870
||||||||||||||||||||||||||||
Sbjct: 5411 agccttcgttgtctgatttgttactttc 5438
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4431
Number of Sequences: 1807
Number of extensions: 4431
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 1
length of query: 870
length of database: 10,358,551
effective HSP length: 16
effective length of query: 854
effective length of database: 10,329,639
effective search space: 8821511706
effective search space used: 8821511706
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)